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NBIP Ireland
Research Office
121 St Stephens Green
Dublin 2
Ireland

nbipadmin@rcsi.ie
+353 1 402 8651



Email:
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Project Title:
Development of new informatics strategies for generation of maximum information from HCA-based screens


Host Laboratory: Department of Physiology and Medical Physics, The Royal College of Surgeons in Ireland, 123 St Stephen's Green, Dublin 2, Ireland.

 

Research Interests: Apoptosis and Cancer

 

Technical Expertise: High Content Analysis

  

Publications:
Articles (2008-2011):

  • Method of calibration of a fluorescence microscope for quantitative studies (2011) KM Kedziora, JHM Prehn, J Dobrucki, T Bernas. Journal of Microscopy 244(1): 101-111
  • Application of detector precision characteristics and histogram packing for compression of biological fluorescence micrographs (2011) Bernas T, Starosolski R, Robinson JP, Rajwa B. Comput Methods Programs Biomed, in press
  • Automatic biodetector of water toxicity (ABTOW) as a tool for examination of phenol and cyanide contaminated water (2010) Woznica A, Nowak A, Karczewski J, Klis Cz, Bernas T. Chemosphere 81(6): 767-772
  • Biofilm 3D architecture of nitrifying bacteria consortia visualized by X-ray computed tomography, Confocal Laser Scanning Microscope (CLSM) and Scanning Electron Microscope (SEM) (2010) Woznica A, Bernas T, Kracz J, Nowak A, Gmur A. Microscopy and Microanalysis, in press
  • Monitoring structure and acivity of nitrifyingbacterial biofilm in an automatic biodetector of water toxicity (2010) Woznica A, Nowak A, Beimfohr C, Karczewski J, Bernas T. Chemosphere 78(9): 1121-1128
  • Automatic noise quantification for confocal fluorescence microscopy images (2010) Paul P, Duessmann H, Bernas T, Huber H, Kalamatianos D. Comput Med Imaging Graph 34(6): 426-434
  • Quantitative and statistical comparison of univariate flow cytometry datastets using histogram similarity measures (2008) Bernas T, Asem EK, Robinson JP, Rajwa B Cytometry 73(8):715-726
  • Application of wavelet denoising to improve compression efficiency while preserving data integrity (2008) Bernas T, Asem EK, Robinson JP, Rajwa B Journal of Microscopy 231(1):81-96

 

Abstract Publication, Oral Communications and Posters (2008-2010):
  • Image cytometry in the analysis of epigenetic modifications in plants (2008) Braszewska A, Bernas T ISAC Meeting, Budapest, Hungary
  • Application Of Texture Measures To Study Effect of B Chromosomes in 3D Architecture of Plant Interphase Nuclei (2008) Sas-Nowosielska H, Bernas T ISAC Meeting, Budapest, Hungary
  • Application Of Detector Precision Characteristics for Denoising of Biological Fluorescence Microscope Images (2008) Bernas T ISAC Meeting, Budapest, Hungary
  • Application of Scanning Electron Microscopy (Sem) in Diagnostics of Plant Epidermis (2008) Karcz J, Bernas T Electron Microscopy Symposium, Wroclaw, Poland


Current Status of Fellowship:
 Tytus completed his fellowship in September 2011. He is continuing his research at the Royal College of Surgeons in Ireland.